Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HOXC6P09630 KRT8P44-201ENST00000441609 1350 ntBASIC18.09■□□□□ 0.49
HOXC6P09630 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC6P09630 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.09■□□□□ 0.49
HOXC6P09630 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC6P09630 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
HOXC6P09630 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.09■□□□□ 0.49
HOXC6P09630 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC6P09630 AC068587.3-201ENST00000526613 355 ntBASIC18.09■□□□□ 0.49
HOXC6P09630 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXC6P09630 PTP4A1P2-201ENST00000546033 454 ntBASIC18.09■□□□□ 0.49
HOXC6P09630 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXC6P09630 AC084346.2-201ENST00000607097 949 ntBASIC18.09■□□□□ 0.49
HOXC6P09630 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC6P09630 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
HOXC6P09630 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXC6P09630 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC6P09630 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXC6P09630 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXC6P09630 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HOXC6P09630 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
HOXC6P09630 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.09■□□□□ 0.49
HOXC6P09630 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXC6P09630 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC6P09630 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.49
HOXC6P09630 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.08■□□□□ 0.49
HOXC6P09630 AL592424.1-201ENST00000563624 1536 ntBASIC18.08■□□□□ 0.49
HOXC6P09630 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC6P09630 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC6P09630 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HOXC6P09630 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC6P09630 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HOXC6P09630 LTB4R2-202ENST00000528054 3092 ntBASIC18.08■□□□□ 0.49
HOXC6P09630 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC6P09630 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC6P09630 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HOXC6P09630 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 AC092933.1-201ENST00000393644 945 ntBASIC18.08■□□□□ 0.48
HOXC6P09630 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.08■□□□□ 0.48
HOXC6P09630 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.08■□□□□ 0.48
HOXC6P09630 BCRP2-202ENST00000447763 634 ntBASIC18.08■□□□□ 0.48
HOXC6P09630 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 BCRP6-201ENST00000510112 632 ntBASIC18.08■□□□□ 0.48
HOXC6P09630 BCRP7-201ENST00000511549 544 ntBASIC18.08■□□□□ 0.48
HOXC6P09630 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.08■□□□□ 0.48
HOXC6P09630 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.08■□□□□ 0.48
HOXC6P09630 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.08■□□□□ 0.48
HOXC6P09630 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 RN7SL219P-201ENST00000582872 296 ntBASIC18.08■□□□□ 0.48
HOXC6P09630 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.08■□□□□ 0.48
HOXC6P09630 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.08■□□□□ 0.48
HOXC6P09630 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
HOXC6P09630 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HOXC6P09630 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXC6P09630 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.07■□□□□ 0.48
HOXC6P09630 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
HOXC6P09630 AD000864.1-201ENST00000624076 2295 ntBASIC18.07■□□□□ 0.48
HOXC6P09630 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
HOXC6P09630 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 AC020907.1-201ENST00000616460 1350 ntBASIC18.07■□□□□ 0.48
HOXC6P09630 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.07■□□□□ 0.48
HOXC6P09630 INTS4P2-202ENST00000614726 2019 ntBASIC18.07■□□□□ 0.48
HOXC6P09630 AC134915.1-201ENST00000426461 574 ntBASIC18.07■□□□□ 0.48
HOXC6P09630 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.07■□□□□ 0.48
HOXC6P09630 RPL13AP25-201ENST00000484130 612 ntBASIC18.07■□□□□ 0.48
HOXC6P09630 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.07■□□□□ 0.48
HOXC6P09630 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.07■□□□□ 0.48
HOXC6P09630 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.07■□□□□ 0.48
HOXC6P09630 GPR182-203ENST00000622922 591 ntBASIC18.07■□□□□ 0.48
HOXC6P09630 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.07■□□□□ 0.48
HOXC6P09630 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.07■□□□□ 0.48
HOXC6P09630 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.07■□□□□ 0.48
HOXC6P09630 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.07■□□□□ 0.48
HOXC6P09630 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.07■□□□□ 0.48
HOXC6P09630 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.07■□□□□ 0.48
HOXC6P09630 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXC6P09630 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HOXC6P09630 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms