Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 CICP24-201ENST00000605464 2705 ntBASIC13.47□□□□□ -0.25
CTSDP07339 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.47□□□□□ -0.25
CTSDP07339 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
CTSDP07339 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.47□□□□□ -0.25
CTSDP07339 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.47□□□□□ -0.25
CTSDP07339 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CTSDP07339 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CTSDP07339 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.47□□□□□ -0.25
CTSDP07339 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CTSDP07339 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.47□□□□□ -0.25
CTSDP07339 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CTSDP07339 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 AC105250.1-201ENST00000509378 2057 ntBASIC13.46□□□□□ -0.25
CTSDP07339 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.46□□□□□ -0.25
CTSDP07339 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.46□□□□□ -0.25
CTSDP07339 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CTSDP07339 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 AC245100.5-201ENST00000452108 331 ntBASIC13.46□□□□□ -0.25
CTSDP07339 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC13.46□□□□□ -0.25
CTSDP07339 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.46□□□□□ -0.25
CTSDP07339 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CTSDP07339 MIR3180-1-201ENST00000580374 94 ntBASIC13.46□□□□□ -0.25
CTSDP07339 MIR3180-3-201ENST00000584616 94 ntBASIC13.46□□□□□ -0.25
CTSDP07339 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CTSDP07339 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.46□□□□□ -0.25
CTSDP07339 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
CTSDP07339 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.46□□□□□ -0.25
CTSDP07339 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.46□□□□□ -0.25
CTSDP07339 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 AC090616.6-203ENST00000579186 1945 ntBASIC13.46□□□□□ -0.25
CTSDP07339 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CTSDP07339 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CTSDP07339 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.46□□□□□ -0.26
CTSDP07339 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CTSDP07339 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CTSDP07339 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CTSDP07339 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.46□□□□□ -0.26
CTSDP07339 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CTSDP07339 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CTSDP07339 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CTSDP07339 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CTSDP07339 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CTSDP07339 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.45□□□□□ -0.26
CTSDP07339 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CTSDP07339 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CTSDP07339 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.45□□□□□ -0.26
CTSDP07339 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms