Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR3DP05423 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
POLR3DP05423 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
POLR3DP05423 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
POLR3DP05423 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
POLR3DP05423 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.29■□□□□ 0.68
POLR3DP05423 AL080243.2-201ENST00000418783 582 ntBASIC19.29■□□□□ 0.68
POLR3DP05423 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.29■□□□□ 0.68
POLR3DP05423 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.29■□□□□ 0.68
POLR3DP05423 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.29■□□□□ 0.68
POLR3DP05423 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
POLR3DP05423 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.29■□□□□ 0.68
POLR3DP05423 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
POLR3DP05423 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.29■□□□□ 0.68
POLR3DP05423 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.29■□□□□ 0.68
POLR3DP05423 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR3DP05423 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
POLR3DP05423 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR3DP05423 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR3DP05423 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 ME2P1-201ENST00000426028 1970 ntBASIC19.28■□□□□ 0.68
POLR3DP05423 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
POLR3DP05423 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
POLR3DP05423 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.28■□□□□ 0.68
POLR3DP05423 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
POLR3DP05423 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
POLR3DP05423 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR3DP05423 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 AL139010.1-201ENST00000454878 894 ntBASIC19.28■□□□□ 0.68
POLR3DP05423 SERBP1P5-201ENST00000510079 1181 ntBASIC19.28■□□□□ 0.68
POLR3DP05423 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR3DP05423 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR3DP05423 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR3DP05423 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.28■□□□□ 0.68
POLR3DP05423 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 AC008894.3-201ENST00000624324 3103 ntBASIC19.28■□□□□ 0.68
POLR3DP05423 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR3DP05423 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
POLR3DP05423 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
POLR3DP05423 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR3DP05423 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.27■□□□□ 0.68
POLR3DP05423 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
POLR3DP05423 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
POLR3DP05423 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
POLR3DP05423 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
POLR3DP05423 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.27■□□□□ 0.68
POLR3DP05423 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.27■□□□□ 0.68
POLR3DP05423 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.27■□□□□ 0.68
POLR3DP05423 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms