Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL035456.1-201ENST00000456064 1369 ntBASIC15.17■□□□□ 0.02
PDGFAP04085 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 AL353705.2-201ENST00000428243 662 ntBASIC15.17■□□□□ 0.02
PDGFAP04085 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.17■□□□□ 0.02
PDGFAP04085 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.17■□□□□ 0.02
PDGFAP04085 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 IGHV3-71-201ENST00000523324 359 ntBASIC15.17■□□□□ 0.02
PDGFAP04085 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.17■□□□□ 0.02
PDGFAP04085 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.17■□□□□ 0.02
PDGFAP04085 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.17■□□□□ 0.02
PDGFAP04085 RN7SL828P-201ENST00000607615 303 ntBASIC15.17■□□□□ 0.02
PDGFAP04085 AC004790.1-201ENST00000612686 536 ntBASIC15.17■□□□□ 0.02
PDGFAP04085 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PDGFAP04085 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 IGHV3-72-202ENST00000621503 303 ntBASIC15.17■□□□□ 0.02
PDGFAP04085 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.17■□□□□ 0.02
PDGFAP04085 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.17■□□□□ 0.02
PDGFAP04085 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 AC106886.4-201ENST00000623557 2502 ntBASIC15.17■□□□□ 0.02
PDGFAP04085 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.17■□□□□ 0.02
PDGFAP04085 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.17■□□□□ 0.02
PDGFAP04085 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 AC099063.4-201ENST00000641099 1602 ntBASIC15.17■□□□□ 0.02
PDGFAP04085 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.17■□□□□ 0.02
PDGFAP04085 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDGFAP04085 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.16■□□□□ 0.02
PDGFAP04085 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PDGFAP04085 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.16■□□□□ 0.02
PDGFAP04085 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.16■□□□□ 0.02
PDGFAP04085 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 DGCR5-201ENST00000399539 862 ntBASIC15.16■□□□□ 0.02
PDGFAP04085 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.16■□□□□ 0.02
PDGFAP04085 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.16■□□□□ 0.02
PDGFAP04085 AC140912.1-201ENST00000577171 1054 ntBASIC15.16■□□□□ 0.02
PDGFAP04085 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.16■□□□□ 0.02
PDGFAP04085 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.16■□□□□ 0.02
PDGFAP04085 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.16■□□□□ 0.02
PDGFAP04085 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.16■□□□□ 0.02
PDGFAP04085 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PDGFAP04085 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 AC073439.1-201ENST00000624121 1774 ntBASIC15.16■□□□□ 0.02
PDGFAP04085 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PDGFAP04085 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PDGFAP04085 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.16■□□□□ 0.02
PDGFAP04085 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PDGFAP04085 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PDGFAP04085 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.15■□□□□ 0.02
PDGFAP04085 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PDGFAP04085 AL021920.2-201ENST00000624828 1351 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms