Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLPTM1O96005 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.35■□□□□ 0.05
CLPTM1O96005 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLPTM1O96005 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.34■□□□□ 0.05
CLPTM1O96005 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.34■□□□□ 0.05
CLPTM1O96005 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPTM1O96005 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLPTM1O96005 AC007326.2-201ENST00000624224 7579 ntBASIC15.34■□□□□ 0.05
CLPTM1O96005 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPTM1O96005 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLPTM1O96005 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.34■□□□□ 0.05
CLPTM1O96005 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CLPTM1O96005 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CLPTM1O96005 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CLPTM1O96005 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLPTM1O96005 AC096633.1-201ENST00000422446 749 ntBASIC15.34■□□□□ 0.05
CLPTM1O96005 DUSP5P1-201ENST00000441325 1139 ntBASIC15.34■□□□□ 0.05
CLPTM1O96005 MINOS1P3-201ENST00000457048 203 ntBASIC15.34■□□□□ 0.05
CLPTM1O96005 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPTM1O96005 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.34■□□□□ 0.05
CLPTM1O96005 FOSL1P1-201ENST00000511041 816 ntBASIC15.34■□□□□ 0.05
CLPTM1O96005 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPTM1O96005 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.34■□□□□ 0.05
CLPTM1O96005 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.34■□□□□ 0.05
CLPTM1O96005 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.34■□□□□ 0.05
CLPTM1O96005 AC099336.1-202ENST00000602961 463 ntBASIC15.34■□□□□ 0.05
CLPTM1O96005 AC138894.3-201ENST00000603787 634 ntBASIC15.34■□□□□ 0.05
CLPTM1O96005 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.34■□□□□ 0.05
CLPTM1O96005 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.34■□□□□ 0.05
CLPTM1O96005 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.34■□□□□ 0.05
CLPTM1O96005 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLPTM1O96005 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
CLPTM1O96005 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPTM1O96005 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPTM1O96005 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPTM1O96005 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPTM1O96005 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLPTM1O96005 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CLPTM1O96005 REXO1L8P-201ENST00000604378 1897 ntBASIC15.33■□□□□ 0.05
CLPTM1O96005 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLPTM1O96005 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CLPTM1O96005 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CLPTM1O96005 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CLPTM1O96005 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CLPTM1O96005 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.33■□□□□ 0.05
CLPTM1O96005 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPTM1O96005 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CLPTM1O96005 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPTM1O96005 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CLPTM1O96005 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLPTM1O96005 COX5BP2-201ENST00000392354 334 ntBASIC15.33■□□□□ 0.04
CLPTM1O96005 AL139011.1-202ENST00000642063 584 ntBASIC15.33■□□□□ 0.04
CLPTM1O96005 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.33■□□□□ 0.04
CLPTM1O96005 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLPTM1O96005 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CLPTM1O96005 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLPTM1O96005 AL390755.1-201ENST00000623716 2027 ntBASIC15.33■□□□□ 0.04
CLPTM1O96005 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.33■□□□□ 0.04
CLPTM1O96005 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLPTM1O96005 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPTM1O96005 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.32■□□□□ 0.04
CLPTM1O96005 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLPTM1O96005 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPTM1O96005 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPTM1O96005 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CLPTM1O96005 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLPTM1O96005 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms