Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 AL359258.3-201ENST00000622910 2331 ntBASIC11.8□□□□□ -0.52
TNFRSF6BO95407 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 AC091167.2-201ENST00000579581 588 ntBASIC11.8□□□□□ -0.52
TNFRSF6BO95407 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 AC145285.6-201ENST00000604632 637 ntBASIC11.8□□□□□ -0.52
TNFRSF6BO95407 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TNFRSF6BO95407 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 SIGLEC16-201ENST00000599858 1437 ntBASIC11.79□□□□□ -0.52
TNFRSF6BO95407 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 LINC01238-205ENST00000567549 1107 ntBASIC11.79□□□□□ -0.52
TNFRSF6BO95407 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 MIR4497-201ENST00000583208 89 ntBASIC11.79□□□□□ -0.52
TNFRSF6BO95407 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 CYP2A7P1-201ENST00000595391 815 ntBASIC11.79□□□□□ -0.52
TNFRSF6BO95407 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TNFRSF6BO95407 AL353135.1-201ENST00000606729 504 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms