Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN11O75508 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN11O75508 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CLDN11O75508 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN11O75508 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN11O75508 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CLDN11O75508 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN11O75508 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN11O75508 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN11O75508 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN11O75508 AL512361.1-201ENST00000554200 418 ntBASIC16.45■□□□□ 0.22
CLDN11O75508 AC010336.2-201ENST00000564226 506 ntBASIC16.45■□□□□ 0.22
CLDN11O75508 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN11O75508 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN11O75508 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN11O75508 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN11O75508 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.45■□□□□ 0.22
CLDN11O75508 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN11O75508 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN11O75508 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN11O75508 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN11O75508 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN11O75508 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN11O75508 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN11O75508 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN11O75508 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN11O75508 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN11O75508 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CLDN11O75508 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 HIST3H2BA-201ENST00000436555 524 ntBASIC16.44■□□□□ 0.22
CLDN11O75508 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN11O75508 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN11O75508 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN11O75508 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.44■□□□□ 0.22
CLDN11O75508 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN11O75508 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN11O75508 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLDN11O75508 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN11O75508 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN11O75508 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN11O75508 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN11O75508 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLDN11O75508 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CLDN11O75508 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN11O75508 AC011477.6-201ENST00000604980 1927 ntBASIC16.43■□□□□ 0.22
CLDN11O75508 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN11O75508 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN11O75508 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN11O75508 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLDN11O75508 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN11O75508 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN11O75508 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN11O75508 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CLDN11O75508 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN11O75508 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN11O75508 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN11O75508 FAM8A3P-201ENST00000427218 844 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms