Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRCH4O75427 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH4O75427 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH4O75427 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRCH4O75427 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 UPF3AP3-201ENST00000420996 769 ntBASIC16.79■□□□□ 0.28
LRCH4O75427 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH4O75427 FAM58DP-201ENST00000428076 619 ntBASIC16.79■□□□□ 0.28
LRCH4O75427 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.79■□□□□ 0.28
LRCH4O75427 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.79■□□□□ 0.28
LRCH4O75427 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH4O75427 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.79■□□□□ 0.28
LRCH4O75427 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.79■□□□□ 0.28
LRCH4O75427 RARRES2P9-201ENST00000565168 469 ntBASIC16.79■□□□□ 0.28
LRCH4O75427 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.79■□□□□ 0.28
LRCH4O75427 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.79■□□□□ 0.28
LRCH4O75427 AC055717.3-201ENST00000622967 595 ntBASIC16.79■□□□□ 0.28
LRCH4O75427 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.79■□□□□ 0.28
LRCH4O75427 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH4O75427 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH4O75427 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.79■□□□□ 0.28
LRCH4O75427 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.79■□□□□ 0.28
LRCH4O75427 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH4O75427 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH4O75427 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH4O75427 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH4O75427 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
LRCH4O75427 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH4O75427 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH4O75427 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRCH4O75427 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH4O75427 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH4O75427 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH4O75427 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRCH4O75427 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH4O75427 AL627223.1-201ENST00000416693 442 ntBASIC16.78■□□□□ 0.28
LRCH4O75427 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.78■□□□□ 0.28
LRCH4O75427 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH4O75427 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.78■□□□□ 0.28
LRCH4O75427 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH4O75427 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH4O75427 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.78■□□□□ 0.28
LRCH4O75427 MIR3687-2-201ENST00000577708 61 ntBASIC16.78■□□□□ 0.28
LRCH4O75427 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH4O75427 MIR3687-1-201ENST00000614492 61 ntBASIC16.78■□□□□ 0.28
LRCH4O75427 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH4O75427 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRCH4O75427 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.78■□□□□ 0.28
LRCH4O75427 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH4O75427 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
LRCH4O75427 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.78■□□□□ 0.28
LRCH4O75427 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRCH4O75427 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRCH4O75427 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.78■□□□□ 0.28
LRCH4O75427 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRCH4O75427 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH4O75427 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.77■□□□□ 0.28
LRCH4O75427 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH4O75427 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.77■□□□□ 0.28
LRCH4O75427 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.77■□□□□ 0.28
LRCH4O75427 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH4O75427 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH4O75427 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH4O75427 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH4O75427 AC018892.3-201ENST00000623986 2499 ntBASIC16.77■□□□□ 0.28
LRCH4O75427 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH4O75427 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LRCH4O75427 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH4O75427 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LRCH4O75427 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH4O75427 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
LRCH4O75427 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH4O75427 AC005237.2-201ENST00000434368 219 ntBASIC16.77■□□□□ 0.28
LRCH4O75427 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH4O75427 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH4O75427 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.77■□□□□ 0.28
LRCH4O75427 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
LRCH4O75427 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.77■□□□□ 0.28
LRCH4O75427 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRCH4O75427 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
LRCH4O75427 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms