Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 AL035633.1-201ENST00000406139 838 ntBASIC15.21■□□□□ 0.03
PRAMEF2O60811 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 AC098859.1-201ENST00000502915 1238 ntBASIC15.21■□□□□ 0.03
PRAMEF2O60811 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF2O60811 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF2O60811 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF2O60811 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF2O60811 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PRAMEF2O60811 AC103702.1-201ENST00000548801 2630 ntBASIC15.21■□□□□ 0.03
PRAMEF2O60811 FO538757.1-201ENST00000623083 1397 ntBASIC15.21■□□□□ 0.02
PRAMEF2O60811 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.21■□□□□ 0.02
PRAMEF2O60811 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF2O60811 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PRAMEF2O60811 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF2O60811 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF2O60811 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF2O60811 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF2O60811 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF2O60811 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 TREML5P-201ENST00000421694 576 ntBASIC15.2■□□□□ 0.02
PRAMEF2O60811 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 IGHV3-42-201ENST00000520410 361 ntBASIC15.2■□□□□ 0.02
PRAMEF2O60811 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 SPTSSB-204ENST00000617024 1292 ntBASIC15.2■□□□□ 0.02
PRAMEF2O60811 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 DOC2GP-204ENST00000639052 2548 ntBASIC15.2■□□□□ 0.02
PRAMEF2O60811 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF2O60811 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF2O60811 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF2O60811 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 AC068418.2-201ENST00000577309 3703 ntBASIC15.19■□□□□ 0.02
PRAMEF2O60811 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF2O60811 AL596087.1-201ENST00000400979 1969 ntBASIC15.19■□□□□ 0.02
PRAMEF2O60811 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms