Protein–RNA interactions for Protein: O60682

MSC, Musculin, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSCO60682 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.02■□□□□ 0.48
MSCO60682 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.02■□□□□ 0.48
MSCO60682 PTP4A1P2-201ENST00000546033 454 ntBASIC18.02■□□□□ 0.48
MSCO60682 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.02■□□□□ 0.48
MSCO60682 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.02■□□□□ 0.48
MSCO60682 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
MSCO60682 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MSCO60682 U82695.1-201ENST00000635752 1889 ntBASIC18.02■□□□□ 0.48
MSCO60682 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.02■□□□□ 0.48
MSCO60682 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MSCO60682 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MSCO60682 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MSCO60682 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.02■□□□□ 0.47
MSCO60682 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.01■□□□□ 0.47
MSCO60682 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.01■□□□□ 0.47
MSCO60682 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 LTB4R2-202ENST00000528054 3092 ntBASIC18.01■□□□□ 0.47
MSCO60682 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
MSCO60682 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.01■□□□□ 0.47
MSCO60682 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.01■□□□□ 0.47
MSCO60682 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.01■□□□□ 0.47
MSCO60682 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.01■□□□□ 0.47
MSCO60682 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.01■□□□□ 0.47
MSCO60682 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
MSCO60682 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSCO60682 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.01■□□□□ 0.47
MSCO60682 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18■□□□□ 0.47
MSCO60682 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18■□□□□ 0.47
MSCO60682 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18■□□□□ 0.47
MSCO60682 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
MSCO60682 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18■□□□□ 0.47
MSCO60682 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
MSCO60682 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18■□□□□ 0.47
MSCO60682 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18■□□□□ 0.47
MSCO60682 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18■□□□□ 0.47
MSCO60682 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18■□□□□ 0.47
MSCO60682 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 RPL13AP25-201ENST00000484130 612 ntBASIC18■□□□□ 0.47
MSCO60682 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18■□□□□ 0.47
MSCO60682 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18■□□□□ 0.47
MSCO60682 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18■□□□□ 0.47
MSCO60682 BRI3BPP1-201ENST00000594224 787 ntBASIC18■□□□□ 0.47
MSCO60682 AC244093.1-201ENST00000610837 814 ntBASIC18■□□□□ 0.47
MSCO60682 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18■□□□□ 0.47
MSCO60682 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18■□□□□ 0.47
MSCO60682 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18■□□□□ 0.47
MSCO60682 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MSCO60682 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MSCO60682 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSCO60682 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18■□□□□ 0.47
MSCO60682 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.99■□□□□ 0.47
MSCO60682 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
MSCO60682 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
MSCO60682 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.99■□□□□ 0.47
MSCO60682 NKILA-202ENST00000614771 2598 ntBASIC17.99■□□□□ 0.47
MSCO60682 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
MSCO60682 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
MSCO60682 LINC01144-201ENST00000626198 1710 ntBASIC17.99■□□□□ 0.47
MSCO60682 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.99■□□□□ 0.47
MSCO60682 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSCO60682 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.99■□□□□ 0.47
MSCO60682 AL355864.2-201ENST00000447420 863 ntBASIC17.99■□□□□ 0.47
MSCO60682 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.99■□□□□ 0.47
MSCO60682 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms