Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SYNGR3O43761 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.1□□□□□ -0.15
SYNGR3O43761 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYNGR3O43761 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.09□□□□□ -0.15
SYNGR3O43761 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.09□□□□□ -0.15
SYNGR3O43761 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.09□□□□□ -0.15
SYNGR3O43761 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.09□□□□□ -0.15
SYNGR3O43761 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
SYNGR3O43761 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SYNGR3O43761 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
SYNGR3O43761 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.09□□□□□ -0.15
SYNGR3O43761 FAM86GP-201ENST00000448322 971 ntBASIC14.09□□□□□ -0.15
SYNGR3O43761 AC067863.1-201ENST00000494933 530 ntBASIC14.09□□□□□ -0.15
SYNGR3O43761 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.09□□□□□ -0.15
SYNGR3O43761 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.09□□□□□ -0.15
SYNGR3O43761 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SYNGR3O43761 SLC25A39P2-201ENST00000537614 270 ntBASIC14.09□□□□□ -0.15
SYNGR3O43761 AL512356.2-201ENST00000546955 174 ntBASIC14.09□□□□□ -0.15
SYNGR3O43761 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.09□□□□□ -0.15
SYNGR3O43761 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SYNGR3O43761 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.09□□□□□ -0.15
SYNGR3O43761 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.09□□□□□ -0.15
SYNGR3O43761 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.09□□□□□ -0.15
SYNGR3O43761 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.09□□□□□ -0.15
SYNGR3O43761 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.09□□□□□ -0.15
SYNGR3O43761 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SYNGR3O43761 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.09□□□□□ -0.15
SYNGR3O43761 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SYNGR3O43761 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYNGR3O43761 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SYNGR3O43761 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SYNGR3O43761 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SYNGR3O43761 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SYNGR3O43761 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.08□□□□□ -0.16
SYNGR3O43761 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.08□□□□□ -0.16
SYNGR3O43761 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.08□□□□□ -0.16
SYNGR3O43761 AC011477.6-201ENST00000604980 1927 ntBASIC14.08□□□□□ -0.16
SYNGR3O43761 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.08□□□□□ -0.16
SYNGR3O43761 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.08□□□□□ -0.16
SYNGR3O43761 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SYNGR3O43761 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SYNGR3O43761 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SYNGR3O43761 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 CNN2P2-201ENST00000443536 909 ntBASIC14.08□□□□□ -0.16
SYNGR3O43761 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.08□□□□□ -0.16
SYNGR3O43761 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.08□□□□□ -0.16
SYNGR3O43761 CNN2P3-201ENST00000450201 906 ntBASIC14.08□□□□□ -0.16
SYNGR3O43761 CYMP-203ENST00000474680 1263 ntBASIC14.08□□□□□ -0.16
SYNGR3O43761 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SYNGR3O43761 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
SYNGR3O43761 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.08□□□□□ -0.16
SYNGR3O43761 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.08□□□□□ -0.16
SYNGR3O43761 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.08□□□□□ -0.16
SYNGR3O43761 AC106028.4-201ENST00000614509 607 ntBASIC14.08□□□□□ -0.16
SYNGR3O43761 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.08□□□□□ -0.16
SYNGR3O43761 AL136317.3-201ENST00000618497 906 ntBASIC14.08□□□□□ -0.16
SYNGR3O43761 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SYNGR3O43761 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 NFIC-211ENST00000641145 8399 ntBASIC14.08□□□□□ -0.16
SYNGR3O43761 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SYNGR3O43761 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.08□□□□□ -0.16
SYNGR3O43761 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.08□□□□□ -0.16
SYNGR3O43761 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
SYNGR3O43761 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.08□□□□□ -0.16
SYNGR3O43761 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SYNGR3O43761 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.08□□□□□ -0.16
SYNGR3O43761 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SYNGR3O43761 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SYNGR3O43761 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms