Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 AC016027.1-202ENST00000607927 1699 ntBASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRGV1A0A0A0MS02 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 AC112191.1-201ENST00000523689 701 ntBASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 AL078644.1-201ENST00000609881 752 ntBASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 FAM197Y3-203ENST00000618346 717 ntBASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 AL513190.1-201ENST00000621254 727 ntBASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.79□□□□□ -0.52
TRGV1A0A0A0MS02 AC092919.2-201ENST00000623631 1645 ntBASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms