Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LINC01558Q9Y6Z2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 AC073548.1-201ENST00000624088 1882 ntBASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 IRS3P-201ENST00000223076 1006 ntBASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 PGM5P2-202ENST00000637225 1043 ntBASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 CSPG4P11-201ENST00000560634 4910 ntBASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC8.3□□□□□ -1.08
LINC01558Q9Y6Z2 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC8.29□□□□□ -1.08
LINC01558Q9Y6Z2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms