Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 AC106028.4-201ENST00000614509 607 ntBASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX49Q9Y6V7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 LINC02084-201ENST00000606069 1096 ntBASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 LINC02228-204ENST00000642115 2962 ntBASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX49Q9Y6V7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 AL513480.1-201ENST00000451731 511 ntBASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 CYMP-203ENST00000474680 1263 ntBASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 AP002472.1-201ENST00000577490 586 ntBASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
DDX49Q9Y6V7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX49Q9Y6V7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms