Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 LINC00982-205ENST00000420957 435 ntBASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 PGM5P2-202ENST00000637225 1043 ntBASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
AP4B1Q9Y6B7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 AC136621.1-201ENST00000624017 2304 ntBASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 AL139424.1-201ENST00000607572 797 ntBASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 MIR7706-201ENST00000613747 67 ntBASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 MIR1199-201ENST00000621445 119 ntBASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
AP4B1Q9Y6B7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4B1Q9Y6B7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms