Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB6Q9Y5F9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 FAM8A3P-201ENST00000427218 844 ntBASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 AP001059.3-201ENST00000619053 235 ntBASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGB6Q9Y5F9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 WASH6P-202ENST00000359512 1437 ntBASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 RNU1-129P-201ENST00000384064 167 ntBASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 FAM86GP-201ENST00000448322 971 ntBASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 U1.21-201ENST00000580816 167 ntBASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms