Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 CR383656.12-201ENST00000549567 513 ntBASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 AL109936.8-201ENST00000641772 604 ntBASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 AL391825.1-201ENST00000457671 1364 ntBASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CTDP1Q9Y5B0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CTDP1Q9Y5B0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CTDP1Q9Y5B0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.64■□□□□ 0.58
CTDP1Q9Y5B0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CTDP1Q9Y5B0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 GK-202ENST00000378941 458 ntTSL 3 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 AC093004.1-201ENST00000508850 424 ntBASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTDP1Q9Y5B0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 MIR600HG-201ENST00000449175 5984 ntBASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 NME2P1-201ENST00000426182 414 ntBASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.63■□□□□ 0.57
CTDP1Q9Y5B0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms