Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAPPC4Q9Y296 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 AC092919.2-201ENST00000623631 1645 ntBASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 PPT1-215ENST00000641471 2368 ntBASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 MKNK2P1-201ENST00000437526 628 ntBASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 ACTG1P14-201ENST00000446382 1122 ntBASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 DNAJB3-201ENST00000446806 729 ntBASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 POU5F1P6-201ENST00000466990 990 ntBASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 KRT18P34-201ENST00000488218 1270 ntBASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 C20orf181-201ENST00000623918 480 ntBASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 WASH6P-202ENST00000359512 1437 ntBASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAPPC4Q9Y296 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 FAM86C2P-203ENST00000528684 1004 ntBASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 AL078644.1-201ENST00000609881 752 ntBASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 NFIC-211ENST00000641145 8399 ntBASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 AKAP8P1-201ENST00000434743 1349 ntBASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms