Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHB16Q9NRJ7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 SNX33P1-201ENST00000592116 1762 ntBASIC14.17□□□□□ -0.14
PCDHB16Q9NRJ7 MYO15B-237ENST00000642007 4893 ntBASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 FGFR3P6-201ENST00000457012 610 ntBASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 PGM5P2-202ENST00000637225 1043 ntBASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 AL359258.3-201ENST00000622910 2331 ntBASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PCDHB16Q9NRJ7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHB16Q9NRJ7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms