Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 RNU1-129P-201ENST00000384064 167 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 AC073621.1-201ENST00000392730 636 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 KRT18P27-201ENST00000427733 1299 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 AC021087.4-201ENST00000563761 564 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 U1.21-201ENST00000580816 167 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 AC006557.2-201ENST00000592985 1240 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 AC091076.1-201ENST00000610741 619 ntBASIC18.1■□□□□ 0.49
CBX8Q9HC52 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CBX8Q9HC52 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CBX8Q9HC52 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.09■□□□□ 0.49
CBX8Q9HC52 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 LAGE3P1-201ENST00000425356 484 ntBASIC18.09■□□□□ 0.49
CBX8Q9HC52 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 AC093724.1-201ENST00000448659 1027 ntBASIC18.09■□□□□ 0.49
CBX8Q9HC52 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 AC021097.1-201ENST00000607902 574 ntBASIC18.09■□□□□ 0.49
CBX8Q9HC52 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CBX8Q9HC52 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC18.09■□□□□ 0.49
CBX8Q9HC52 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CBX8Q9HC52 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CBX8Q9HC52 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.08■□□□□ 0.49
CBX8Q9HC52 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CBX8Q9HC52 AC026748.1-201ENST00000624349 3251 ntBASIC18.08■□□□□ 0.49
CBX8Q9HC52 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CBX8Q9HC52 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.08■□□□□ 0.49
CBX8Q9HC52 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CBX8Q9HC52 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
CBX8Q9HC52 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CBX8Q9HC52 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX8Q9HC52 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 AC107918.4-202ENST00000641623 219 ntBASIC18.08■□□□□ 0.48
CBX8Q9HC52 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX8Q9HC52 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX8Q9HC52 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX8Q9HC52 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX8Q9HC52 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CBX8Q9HC52 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CBX8Q9HC52 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.08■□□□□ 0.48
CBX8Q9HC52 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.07■□□□□ 0.48
CBX8Q9HC52 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CBX8Q9HC52 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms