Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 MED15P5-201ENST00000423150 992 ntBASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AC068137.2-201ENST00000605408 478 ntBASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AC027601.4-201ENST00000611259 610 ntBASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AL161645.1-201ENST00000622716 1255 ntBASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC68Q9H2F9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 AL078644.1-201ENST00000609881 752 ntBASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 AL136379.1-201ENST00000623471 2642 ntBASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC68Q9H2F9 AL592424.1-201ENST00000563624 1536 ntBASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 AC026396.1-201ENST00000419388 421 ntBASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 AC092474.2-201ENST00000424288 719 ntBASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 KRT18P2-201ENST00000447938 1258 ntBASIC16.29■□□□□ 0.2
CCDC68Q9H2F9 AC074386.1-202ENST00000463561 864 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms