Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CDCA3Q99618 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.62■□□□□ 0.25
CDCA3Q99618 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDCA3Q99618 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
CDCA3Q99618 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.61■□□□□ 0.25
CDCA3Q99618 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.61■□□□□ 0.25
CDCA3Q99618 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.61■□□□□ 0.25
CDCA3Q99618 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDCA3Q99618 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.61■□□□□ 0.25
CDCA3Q99618 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDCA3Q99618 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 CALR4P-201ENST00000431943 946 ntBASIC16.61■□□□□ 0.25
CDCA3Q99618 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.61■□□□□ 0.25
CDCA3Q99618 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.61■□□□□ 0.25
CDCA3Q99618 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.61■□□□□ 0.25
CDCA3Q99618 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.61■□□□□ 0.25
CDCA3Q99618 AC025279.2-201ENST00000569730 653 ntBASIC16.61■□□□□ 0.25
CDCA3Q99618 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.61■□□□□ 0.25
CDCA3Q99618 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.61■□□□□ 0.25
CDCA3Q99618 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.61■□□□□ 0.25
CDCA3Q99618 AL450472.2-201ENST00000603663 1156 ntBASIC16.61■□□□□ 0.25
CDCA3Q99618 AC106872.11-201ENST00000605838 421 ntBASIC16.61■□□□□ 0.25
CDCA3Q99618 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.61■□□□□ 0.25
CDCA3Q99618 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.61■□□□□ 0.25
CDCA3Q99618 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.61■□□□□ 0.25
CDCA3Q99618 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.61■□□□□ 0.25
CDCA3Q99618 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 PP12613-201ENST00000424958 2230 ntBASIC16.61■□□□□ 0.25
CDCA3Q99618 REXO1L8P-201ENST00000604378 1897 ntBASIC16.61■□□□□ 0.25
CDCA3Q99618 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDCA3Q99618 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.6■□□□□ 0.25
CDCA3Q99618 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDCA3Q99618 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.6■□□□□ 0.25
CDCA3Q99618 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CDCA3Q99618 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 AC006001.1-201ENST00000325130 474 ntBASIC16.6■□□□□ 0.25
CDCA3Q99618 MIR326-201ENST00000362220 95 ntBASIC16.6■□□□□ 0.25
CDCA3Q99618 ELK2AP-201ENST00000392510 1007 ntBASIC16.6■□□□□ 0.25
CDCA3Q99618 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.6■□□□□ 0.25
CDCA3Q99618 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.6■□□□□ 0.25
CDCA3Q99618 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.6■□□□□ 0.25
CDCA3Q99618 Z93015.1-201ENST00000451718 390 ntBASIC16.6■□□□□ 0.25
CDCA3Q99618 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.6■□□□□ 0.25
CDCA3Q99618 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.6■□□□□ 0.25
CDCA3Q99618 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.6■□□□□ 0.25
CDCA3Q99618 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.6■□□□□ 0.25
CDCA3Q99618 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.6■□□□□ 0.25
CDCA3Q99618 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.6■□□□□ 0.25
CDCA3Q99618 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDCA3Q99618 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CDCA3Q99618 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDCA3Q99618 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.6■□□□□ 0.25
CDCA3Q99618 AC141586.5-201ENST00000624546 2050 ntBASIC16.6■□□□□ 0.25
CDCA3Q99618 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms