Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SYNGAP1Q96PV0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 AC112492.5-201ENST00000421897 457 ntBASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 TTTY23B-201ENST00000442790 549 ntBASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 CTBP2P3-201ENST00000585629 1255 ntBASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 AC025048.3-201ENST00000590609 569 ntBASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 AC005702.4-201ENST00000618393 416 ntBASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SYNGAP1Q96PV0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 MIR1909-201ENST00000411312 80 ntBASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 RAB43P1-201ENST00000561790 589 ntBASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 LINC01144-201ENST00000626198 1710 ntBASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
SYNGAP1Q96PV0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms