Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AP1S3Q96PC3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 AL365203.3-201ENST00000609742 2057 ntBASIC12.31□□□□□ -0.44
AP1S3Q96PC3 SNX18-202ENST00000343017 3140 ntBASIC12.31□□□□□ -0.44
AP1S3Q96PC3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 LINC00895-201ENST00000629028 1637 ntBASIC12.31□□□□□ -0.44
AP1S3Q96PC3 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 TSPY5P-201ENST00000426936 936 ntBASIC12.31□□□□□ -0.44
AP1S3Q96PC3 AC117947.1-201ENST00000427448 529 ntBASIC12.31□□□□□ -0.44
AP1S3Q96PC3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 AC005336.2-201ENST00000593183 939 ntBASIC12.31□□□□□ -0.44
AP1S3Q96PC3 AL353801.3-201ENST00000609898 542 ntBASIC12.31□□□□□ -0.44
AP1S3Q96PC3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ALOX12P2-203ENST00000570921 1945 ntBASIC12.31□□□□□ -0.44
AP1S3Q96PC3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
AP1S3Q96PC3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 ME2P1-201ENST00000426028 1970 ntBASIC12.3□□□□□ -0.44
AP1S3Q96PC3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 AC139749.1-202ENST00000617529 3139 ntBASIC12.3□□□□□ -0.44
AP1S3Q96PC3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 AL645929.1-201ENST00000420084 975 ntBASIC12.3□□□□□ -0.44
AP1S3Q96PC3 KRT18P38-201ENST00000449496 1282 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms