Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 COX5BP8-201ENST00000416911 349 ntBASIC13.17□□□□□ -0.3
ZNF48Q96MX3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 AL358472.5-202ENST00000641448 1267 ntBASIC13.17□□□□□ -0.3
ZNF48Q96MX3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF48Q96MX3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 CYP2T1P-202ENST00000641596 2535 ntBASIC13.16□□□□□ -0.3
ZNF48Q96MX3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 AC093724.1-201ENST00000448659 1027 ntBASIC13.16□□□□□ -0.3
ZNF48Q96MX3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 AL132655.2-201ENST00000596276 594 ntBASIC13.16□□□□□ -0.3
ZNF48Q96MX3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.16□□□□□ -0.3
ZNF48Q96MX3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF48Q96MX3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 PCDHB19P-201ENST00000570871 2371 ntBASIC13.15□□□□□ -0.3
ZNF48Q96MX3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms