Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HPS3Q969F9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.92■□□□□ 0.46
HPS3Q969F9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS3Q969F9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.92■□□□□ 0.46
HPS3Q969F9 RNA5SP410-201ENST00000516285 106 ntBASIC17.92■□□□□ 0.46
HPS3Q969F9 MIR3687-2-201ENST00000577708 61 ntBASIC17.92■□□□□ 0.46
HPS3Q969F9 MIR3687-1-201ENST00000614492 61 ntBASIC17.92■□□□□ 0.46
HPS3Q969F9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HPS3Q969F9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS3Q969F9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HPS3Q969F9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS3Q969F9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS3Q969F9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HPS3Q969F9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.92■□□□□ 0.46
HPS3Q969F9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.91■□□□□ 0.46
HPS3Q969F9 AP3S2-216ENST00000617003 1561 ntBASIC17.91■□□□□ 0.46
HPS3Q969F9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 AC018892.3-201ENST00000623986 2499 ntBASIC17.91■□□□□ 0.46
HPS3Q969F9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.91■□□□□ 0.46
HPS3Q969F9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.91■□□□□ 0.46
HPS3Q969F9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.91■□□□□ 0.46
HPS3Q969F9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.91■□□□□ 0.46
HPS3Q969F9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.91■□□□□ 0.46
HPS3Q969F9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HPS3Q969F9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.91■□□□□ 0.46
HPS3Q969F9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HPS3Q969F9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HPS3Q969F9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HPS3Q969F9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS3Q969F9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.9■□□□□ 0.46
HPS3Q969F9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HPS3Q969F9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS3Q969F9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS3Q969F9 AC005237.2-201ENST00000434368 219 ntBASIC17.9■□□□□ 0.46
HPS3Q969F9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS3Q969F9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.9■□□□□ 0.46
HPS3Q969F9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS3Q969F9 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.9■□□□□ 0.46
HPS3Q969F9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.9■□□□□ 0.46
HPS3Q969F9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS3Q969F9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.9■□□□□ 0.46
HPS3Q969F9 AC084121.4-201ENST00000641598 221 ntBASIC17.9■□□□□ 0.46
HPS3Q969F9 AF228730.8-201ENST00000642140 221 ntBASIC17.9■□□□□ 0.46
HPS3Q969F9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HPS3Q969F9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.9■□□□□ 0.46
HPS3Q969F9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
HPS3Q969F9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HPS3Q969F9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.9■□□□□ 0.46
HPS3Q969F9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HPS3Q969F9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
HPS3Q969F9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HPS3Q969F9 AL136982.4-201ENST00000437689 1740 ntBASIC17.89■□□□□ 0.46
HPS3Q969F9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
HPS3Q969F9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms