Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 CRYGEP-201ENST00000412192 528 ntBASIC14.57□□□□□ -0.08
PTP4A1Q93096 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 AL513480.1-201ENST00000451731 511 ntBASIC14.57□□□□□ -0.08
PTP4A1Q93096 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTP4A1Q93096 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.57□□□□□ -0.08
PTP4A1Q93096 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 HAUS4P1-201ENST00000406739 1145 ntBASIC14.56□□□□□ -0.08
PTP4A1Q93096 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 AC009947.1-201ENST00000444350 727 ntBASIC14.56□□□□□ -0.08
PTP4A1Q93096 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 CICP13-201ENST00000422015 2789 ntBASIC14.56□□□□□ -0.08
PTP4A1Q93096 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTP4A1Q93096 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.56□□□□□ -0.08
PTP4A1Q93096 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms