Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 RNF152P1-201ENST00000397754 604 ntBASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 AL161772.1-201ENST00000610494 4412 ntBASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 FLJ16779-201ENST00000612722 7638 ntBASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 AC092127.1-201ENST00000567093 3455 ntBASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM4Q8WVI0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 AC096582.2-201ENST00000510860 516 ntBASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 KRT8P26-201ENST00000534154 1276 ntBASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 AC011498.5-201ENST00000592027 486 ntBASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 LINC01023-201ENST00000606054 436 ntBASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 AC007686.3-201ENST00000619017 3487 ntBASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMIM4Q8WVI0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM4Q8WVI0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms