Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NVL-202ENST00000340871 2431 ntTSL 2 BASIC9.92□□□□□ -0.82
SVIPQ8NHG7 ZNF223-201ENST00000434772 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SVIPQ8NHG7 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SVIPQ8NHG7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SVIPQ8NHG7 AC018737.2-201ENST00000624478 1512 ntBASIC9.92□□□□□ -0.82
SVIPQ8NHG7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SVIPQ8NHG7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 LINC00319-202ENST00000448049 3507 ntTSL 5 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 RHOBTB2-205ENST00000519685 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 PLA2G2D-201ENST00000375105 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SHROOM2-202ENST00000418909 4615 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 UNC45B-203ENST00000591048 2553 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 MRVI1-215ENST00000541483 2468 ntTSL 2 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 FAM90A12P-201ENST00000519497 2375 ntBASIC9.91□□□□□ -0.82
SVIPQ8NHG7 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 PISD-201ENST00000266095 2655 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 ZFP64-204ENST00000371515 3040 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 GABRA1-204ENST00000437025 4087 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 ISG20L2-201ENST00000313146 3303 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 MYHAS-201ENST00000587182 2274 ntTSL 5 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 AC024600.1-201ENST00000425902 2572 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 AL353611.2-201ENST00000625008 2897 ntBASIC9.91□□□□□ -0.82
SVIPQ8NHG7 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 TBX19-201ENST00000367821 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SVIPQ8NHG7 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 BX537318.2-201ENST00000624893 4162 ntBASIC9.9□□□□□ -0.82
SVIPQ8NHG7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 GOLGA2P1-201ENST00000512938 2906 ntBASIC9.9□□□□□ -0.82
SVIPQ8NHG7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 FPR2-201ENST00000340023 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 NUBP1-201ENST00000283027 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 ACSL6-204ENST00000379244 2658 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
SVIPQ8NHG7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms