RNA–Protein interactions for RNA: ENST00000448049.1

LINC00319-202, long intergenic non-protein coding RNA 319, humanhuman

TSL 5 BASIC

Gene LINC00319, Length 3,507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00319-202ENST00000448049 NISCHQ9Y2I1 1504 aa22.3■■□□□ 1.16
LINC00319-202ENST00000448049 DCAF8L2P0C7V8 631 aa20.38■□□□□ 0.85
LINC00319-202ENST00000448049 SHROOM4Q9ULL8 1493 aa20.19■□□□□ 0.82
LINC00319-202ENST00000448049 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.78
LINC00319-202ENST00000448049 HRCP23327 699 aa19.67■□□□□ 0.74
LINC00319-202ENST00000448049 PELP1Q8IZL8 1130 aaKnown RBP19.36■□□□□ 0.69
LINC00319-202ENST00000448049 PPARGC1BQ86YN6 1023 aaKnown RBP19.3■□□□□ 0.68
LINC00319-202ENST00000448049 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
LINC00319-202ENST00000448049 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
LINC00319-202ENST00000448049 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
LINC00319-202ENST00000448049 EHMT2Q96KQ7 1210 aa18.86■□□□□ 0.61
LINC00319-202ENST00000448049 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
LINC00319-202ENST00000448049 MYT1Q01538 1121 aa18.69■□□□□ 0.58
LINC00319-202ENST00000448049 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
LINC00319-202ENST00000448049 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
LINC00319-202ENST00000448049 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
LINC00319-202ENST00000448049 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
LINC00319-202ENST00000448049 FAM9AQ8IZU1 332 aaPredicted RBP18.6■□□□□ 0.57
LINC00319-202ENST00000448049 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
LINC00319-202ENST00000448049 ABCC9O60706 1549 aa18.5■□□□□ 0.55
LINC00319-202ENST00000448049 CCDC180Q9P1Z9 1646 aa18.47■□□□□ 0.55
LINC00319-202ENST00000448049 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
LINC00319-202ENST00000448049 ACIN1Q9UKV3 1341 aaKnown RBP18.19■□□□□ 0.5
LINC00319-202ENST00000448049 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
LINC00319-202ENST00000448049 NEUROD1Q13562 356 aa18.14■□□□□ 0.49
LINC00319-202ENST00000448049 TTBK1Q5TCY1 1321 aaPredicted RBP18.13■□□□□ 0.49
LINC00319-202ENST00000448049 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.49
LINC00319-202ENST00000448049 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
LINC00319-202ENST00000448049 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
LINC00319-202ENST00000448049 RANGAP1P46060 587 aaPredicted RBP17.87■□□□□ 0.45
LINC00319-202ENST00000448049 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
LINC00319-202ENST00000448049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
LINC00319-202ENST00000448049 CCER1Q8TC90 406 aaPredicted RBP17.85■□□□□ 0.45
LINC00319-202ENST00000448049 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
LINC00319-202ENST00000448049 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
LINC00319-202ENST00000448049 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
LINC00319-202ENST00000448049 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.42
LINC00319-202ENST00000448049 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
LINC00319-202ENST00000448049 ZNF316A6NFI3 1004 aaPredicted RBP17.5■□□□□ 0.39
LINC00319-202ENST00000448049 MROH2BQ7Z745 1585 aa17.5■□□□□ 0.39
LINC00319-202ENST00000448049 NACADO15069 1562 aa17.48■□□□□ 0.39
LINC00319-202ENST00000448049 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
LINC00319-202ENST00000448049 MIER1Q8N108 512 aa17.39■□□□□ 0.38
LINC00319-202ENST00000448049 APLP2Q06481 763 aa17.33■□□□□ 0.37
LINC00319-202ENST00000448049 WIZO95785 1651 aa17.33■□□□□ 0.36
LINC00319-202ENST00000448049 ANP32EQ9BTT0 268 aa17.29■□□□□ 0.36
LINC00319-202ENST00000448049 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
LINC00319-202ENST00000448049 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
LINC00319-202ENST00000448049 ATP1B4Q9UN42 357 aaPredicted RBP17.2■□□□□ 0.34
LINC00319-202ENST00000448049 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
LINC00319-202ENST00000448049 BAZ1AQ9NRL2 1556 aaPredicted RBP17.16■□□□□ 0.34
LINC00319-202ENST00000448049 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
LINC00319-202ENST00000448049 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
LINC00319-202ENST00000448049 TSHZ2Q9NRE2 1034 aa17.11■□□□□ 0.33
LINC00319-202ENST00000448049 SOGA1O94964 1423 aa17.1■□□□□ 0.33
LINC00319-202ENST00000448049 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
LINC00319-202ENST00000448049 ITGAEP38570 1179 aa17.09■□□□□ 0.33
LINC00319-202ENST00000448049 CLSPNQ9HAW4 1339 aa17.09■□□□□ 0.33
LINC00319-202ENST00000448049 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
LINC00319-202ENST00000448049 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.3
LINC00319-202ENST00000448049 PRKCSHP14314 528 aaPredicted RBP16.95■□□□□ 0.3
LINC00319-202ENST00000448049 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
LINC00319-202ENST00000448049 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
LINC00319-202ENST00000448049 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
LINC00319-202ENST00000448049 P3H3Q8IVL6 736 aa16.91■□□□□ 0.3
LINC00319-202ENST00000448049 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
LINC00319-202ENST00000448049 BCANQ96GW7 911 aa16.87■□□□□ 0.29
LINC00319-202ENST00000448049 SMARCA2P51531 1590 aa16.8■□□□□ 0.28
LINC00319-202ENST00000448049 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
LINC00319-202ENST00000448049 FKBP8Q14318 412 aa16.74■□□□□ 0.27
LINC00319-202ENST00000448049 CLIP1P30622 1438 aa16.74■□□□□ 0.27
LINC00319-202ENST00000448049 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
LINC00319-202ENST00000448049 RBM19Q9Y4C8 960 aaKnown RBP16.71■□□□□ 0.27
LINC00319-202ENST00000448049 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
LINC00319-202ENST00000448049 KCNH8Q96L42 1107 aa16.69■□□□□ 0.26
LINC00319-202ENST00000448049 BICRAQ9NZM4 1560 aa16.68■□□□□ 0.26
LINC00319-202ENST00000448049 ARID3CA6NKF2 412 aa16.67■□□□□ 0.26
LINC00319-202ENST00000448049 FAM50AQ14320 339 aaKnown RBP16.67■□□□□ 0.26
LINC00319-202ENST00000448049 EEA1Q15075 1411 aa16.67■□□□□ 0.26
LINC00319-202ENST00000448049 UNC13AQ9UPW8 1703 aa16.66■□□□□ 0.26
LINC00319-202ENST00000448049 NEFLP07196 543 aa16.63■□□□□ 0.25
LINC00319-202ENST00000448049 DHX57Q6P158 1386 aaKnown RBP16.62■□□□□ 0.25
LINC00319-202ENST00000448049 ERICH6Q7L0X2 663 aa16.59■□□□□ 0.25
LINC00319-202ENST00000448049 RAPGEF2Q9Y4G8 1499 aa16.58■□□□□ 0.24
LINC00319-202ENST00000448049 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
LINC00319-202ENST00000448049 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
LINC00319-202ENST00000448049 MSH5O43196 834 aa16.56■□□□□ 0.24
LINC00319-202ENST00000448049 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
LINC00319-202ENST00000448049 SYNJ1O43426 1573 aa16.5■□□□□ 0.23
LINC00319-202ENST00000448049 DDX10Q13206 875 aaKnown RBP16.47■□□□□ 0.23
LINC00319-202ENST00000448049 KIF27Q86VH2 1401 aa16.47■□□□□ 0.23
LINC00319-202ENST00000448049 TRIM52Q96A61 297 aa16.45■□□□□ 0.22
LINC00319-202ENST00000448049 CUX2O14529 1486 aa16.44■□□□□ 0.22
LINC00319-202ENST00000448049 FBLN2P98095 1184 aa16.44■□□□□ 0.22
LINC00319-202ENST00000448049 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
LINC00319-202ENST00000448049 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
LINC00319-202ENST00000448049 CNGB1Q14028 1251 aaPredicted RBP16.38■□□□□ 0.21
LINC00319-202ENST00000448049 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
LINC00319-202ENST00000448049 ANO8Q9HCE9 1232 aaPredicted RBP16.37■□□□□ 0.21
LINC00319-202ENST00000448049 DEKP35659 375 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms