Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
RTL9Q8NET4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RTL9Q8NET4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RTL9Q8NET4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.76■□□□□ 0.75
RTL9Q8NET4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.76■□□□□ 0.75
RTL9Q8NET4 AC092552.1-201ENST00000547243 906 ntBASIC19.76■□□□□ 0.75
RTL9Q8NET4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.76■□□□□ 0.75
RTL9Q8NET4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
RTL9Q8NET4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RTL9Q8NET4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTL9Q8NET4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 AL512343.1-201ENST00000605837 169 ntBASIC19.75■□□□□ 0.75
RTL9Q8NET4 RPSAP52-203ENST00000622976 1023 ntBASIC19.75■□□□□ 0.75
RTL9Q8NET4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.75■□□□□ 0.75
RTL9Q8NET4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTL9Q8NET4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 RN7SL399P-201ENST00000471648 279 ntBASIC19.74■□□□□ 0.75
RTL9Q8NET4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 SNX29P1-201ENST00000548357 1007 ntBASIC19.74■□□□□ 0.75
RTL9Q8NET4 AC036164.1-201ENST00000570544 333 ntBASIC19.74■□□□□ 0.75
RTL9Q8NET4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 AD000864.1-201ENST00000624076 2295 ntBASIC19.74■□□□□ 0.75
RTL9Q8NET4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RTL9Q8NET4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTL9Q8NET4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL9Q8NET4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RTL9Q8NET4 AC092171.3-201ENST00000610122 2651 ntBASIC19.73■□□□□ 0.75
RTL9Q8NET4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTL9Q8NET4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RTL9Q8NET4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL9Q8NET4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.73■□□□□ 0.75
RTL9Q8NET4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.73■□□□□ 0.75
RTL9Q8NET4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL9Q8NET4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL9Q8NET4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTL9Q8NET4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTL9Q8NET4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.73■□□□□ 0.75
RTL9Q8NET4 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms