Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KDM1BQ8NB78 AC005622.1-201ENST00000636801 1703 ntBASIC16.5■□□□□ 0.23
KDM1BQ8NB78 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.5■□□□□ 0.23
KDM1BQ8NB78 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 MRPS18AP1-201ENST00000414458 589 ntBASIC16.5■□□□□ 0.23
KDM1BQ8NB78 AL080243.2-201ENST00000418783 582 ntBASIC16.5■□□□□ 0.23
KDM1BQ8NB78 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.5■□□□□ 0.23
KDM1BQ8NB78 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 MIR4321-201ENST00000592276 80 ntBASIC16.5■□□□□ 0.23
KDM1BQ8NB78 AC009118.2-201ENST00000613275 655 ntBASIC16.5■□□□□ 0.23
KDM1BQ8NB78 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 AC008761.3-201ENST00000624803 892 ntBASIC16.5■□□□□ 0.23
KDM1BQ8NB78 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDM1BQ8NB78 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 AC236430.1-201ENST00000402231 743 ntBASIC16.49■□□□□ 0.23
KDM1BQ8NB78 AL035633.1-201ENST00000406139 838 ntBASIC16.49■□□□□ 0.23
KDM1BQ8NB78 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 COX20P2-201ENST00000452636 358 ntBASIC16.49■□□□□ 0.23
KDM1BQ8NB78 AL139010.1-201ENST00000454878 894 ntBASIC16.49■□□□□ 0.23
KDM1BQ8NB78 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 LINC02560-201ENST00000596379 459 ntBASIC16.49■□□□□ 0.23
KDM1BQ8NB78 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM1BQ8NB78 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KDM1BQ8NB78 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM1BQ8NB78 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM1BQ8NB78 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM1BQ8NB78 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM1BQ8NB78 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KDM1BQ8NB78 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM1BQ8NB78 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KDM1BQ8NB78 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms