Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 PMS2P7-201ENST00000506558 1336 ntBASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSMEM1Q8N8F7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 HAUS4P1-201ENST00000406739 1145 ntBASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 MED15P5-201ENST00000423150 992 ntBASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 PRYP6-201ENST00000514804 343 ntBASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 MIR4321-201ENST00000592276 80 ntBASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 AC073389.1-201ENST00000595595 795 ntBASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 AL121894.2-201ENST00000602977 491 ntBASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 AC140113.2-201ENST00000604370 208 ntBASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 AC120114.3-201ENST00000611923 658 ntBASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSMEM1Q8N8F7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 AC144831.1-201ENST00000573312 2656 ntBASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms