Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 HLA-H-201ENST00000383620 1096 ntBASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 AC142381.1-201ENST00000426099 345 ntBASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 HTR5BP-201ENST00000430851 1154 ntBASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 AC061975.2-201ENST00000581722 295 ntBASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.8□□□□□ -0.04
ZNF440Q8IYI8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 MIR346-201ENST00000362234 95 ntBASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 AC079140.1-201ENST00000508039 487 ntBASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 RNA5SP410-201ENST00000516285 106 ntBASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 AP000842.3-202ENST00000569238 1080 ntBASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF440Q8IYI8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 FOXO1B-201ENST00000504678 1527 ntBASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.78□□□□□ -0.04
ZNF440Q8IYI8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms