Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRC28Q86X40 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRC28Q86X40 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRC28Q86X40 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRRC28Q86X40 AC006486.2-201ENST00000624246 2199 ntBASIC14.48□□□□□ -0.09
LRRC28Q86X40 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRC28Q86X40 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRC28Q86X40 AL671710.1-201ENST00000610245 2349 ntBASIC14.48□□□□□ -0.09
LRRC28Q86X40 REXO1L8P-201ENST00000604378 1897 ntBASIC14.48□□□□□ -0.09
LRRC28Q86X40 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRRC28Q86X40 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LRRC28Q86X40 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRRC28Q86X40 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.48□□□□□ -0.09
LRRC28Q86X40 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LRRC28Q86X40 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRC28Q86X40 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LRRC28Q86X40 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRRC28Q86X40 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 AC069224.1-201ENST00000566372 1715 ntBASIC14.47□□□□□ -0.09
LRRC28Q86X40 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 AC016027.1-202ENST00000607927 1699 ntBASIC14.47□□□□□ -0.09
LRRC28Q86X40 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 AP002414.1-201ENST00000391405 1147 ntBASIC14.47□□□□□ -0.09
LRRC28Q86X40 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.47□□□□□ -0.09
LRRC28Q86X40 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 Z83851.2-201ENST00000609564 659 ntBASIC14.47□□□□□ -0.09
LRRC28Q86X40 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 AC104109.2-201ENST00000602919 1418 ntBASIC14.47□□□□□ -0.09
LRRC28Q86X40 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRRC28Q86X40 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRC28Q86X40 SSR4P1-203ENST00000599569 2260 ntBASIC14.46□□□□□ -0.09
LRRC28Q86X40 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 ELK2BP-201ENST00000415014 1224 ntBASIC14.46□□□□□ -0.09
LRRC28Q86X40 PMS2P1-201ENST00000431037 1228 ntBASIC14.46□□□□□ -0.09
LRRC28Q86X40 KRT18P58-201ENST00000527480 1120 ntBASIC14.46□□□□□ -0.09
LRRC28Q86X40 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRC28Q86X40 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC28Q86X40 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRC28Q86X40 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.46□□□□□ -0.1
LRRC28Q86X40 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
LRRC28Q86X40 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LRRC28Q86X40 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
LRRC28Q86X40 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRC28Q86X40 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRC28Q86X40 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRC28Q86X40 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms