Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDH1Q08174 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDH1Q08174 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
PCDH1Q08174 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH1Q08174 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH1Q08174 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH1Q08174 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PCDH1Q08174 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH1Q08174 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH1Q08174 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH1Q08174 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 YBX1P5-201ENST00000509441 847 ntBASIC15.62■□□□□ 0.09
PCDH1Q08174 KRT8P48-201ENST00000515599 1220 ntBASIC15.62■□□□□ 0.09
PCDH1Q08174 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDH1Q08174 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDH1Q08174 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH1Q08174 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDH1Q08174 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PCDH1Q08174 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDH1Q08174 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDH1Q08174 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDH1Q08174 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
PCDH1Q08174 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDH1Q08174 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH1Q08174 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH1Q08174 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH1Q08174 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PCDH1Q08174 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDH1Q08174 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PCDH1Q08174 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDH1Q08174 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDH1Q08174 HTR5BP-201ENST00000430851 1154 ntBASIC15.61■□□□□ 0.09
PCDH1Q08174 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDH1Q08174 AC079140.1-201ENST00000508039 487 ntBASIC15.61■□□□□ 0.09
PCDH1Q08174 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDH1Q08174 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDH1Q08174 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDH1Q08174 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH1Q08174 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDH1Q08174 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
PCDH1Q08174 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
PCDH1Q08174 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDH1Q08174 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDH1Q08174 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDH1Q08174 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDH1Q08174 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDH1Q08174 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms