Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 HAUS4P1-201ENST00000406739 1145 ntBASIC15.62■□□□□ 0.09
HMGCS1Q01581 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 AC068137.2-201ENST00000605408 478 ntBASIC15.62■□□□□ 0.09
HMGCS1Q01581 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 AL589702.1-201ENST00000641229 1509 ntBASIC15.62■□□□□ 0.09
HMGCS1Q01581 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCS1Q01581 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGCS1Q01581 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 WASH6P-202ENST00000359512 1437 ntBASIC15.61■□□□□ 0.09
HMGCS1Q01581 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 AC073347.1-201ENST00000421633 2643 ntBASIC15.61■□□□□ 0.09
HMGCS1Q01581 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 AP000347.1-202ENST00000435868 847 ntBASIC15.61■□□□□ 0.09
HMGCS1Q01581 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 AC074386.1-202ENST00000463561 864 ntBASIC15.61■□□□□ 0.09
HMGCS1Q01581 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
HMGCS1Q01581 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HMGCS1Q01581 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HMGCS1Q01581 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.6■□□□□ 0.09
HMGCS1Q01581 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms