Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 SLED1-202ENST00000512051 380 ntBASIC18.36■□□□□ 0.53
HTRA3P83110 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HTRA3P83110 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HTRA3P83110 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.36■□□□□ 0.53
HTRA3P83110 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HTRA3P83110 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
HTRA3P83110 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HTRA3P83110 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.36■□□□□ 0.53
HTRA3P83110 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HTRA3P83110 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.35■□□□□ 0.53
HTRA3P83110 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.35■□□□□ 0.53
HTRA3P83110 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.35■□□□□ 0.53
HTRA3P83110 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.35■□□□□ 0.53
HTRA3P83110 AC074138.1-201ENST00000611182 1303 ntBASIC18.35■□□□□ 0.53
HTRA3P83110 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.35■□□□□ 0.53
HTRA3P83110 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.35■□□□□ 0.53
HTRA3P83110 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.35■□□□□ 0.53
HTRA3P83110 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.35■□□□□ 0.53
HTRA3P83110 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.35■□□□□ 0.53
HTRA3P83110 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HTRA3P83110 AL132780.4-201ENST00000624870 1135 ntBASIC18.35■□□□□ 0.53
HTRA3P83110 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HTRA3P83110 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HTRA3P83110 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HTRA3P83110 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.34■□□□□ 0.53
HTRA3P83110 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 AL691432.1-201ENST00000596308 1422 ntBASIC18.34■□□□□ 0.53
HTRA3P83110 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HTRA3P83110 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.34■□□□□ 0.53
HTRA3P83110 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HTRA3P83110 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.34■□□□□ 0.53
HTRA3P83110 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 AL627231.1-201ENST00000394467 1125 ntBASIC18.34■□□□□ 0.53
HTRA3P83110 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.34■□□□□ 0.53
HTRA3P83110 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.34■□□□□ 0.53
HTRA3P83110 AL353637.1-201ENST00000451571 732 ntBASIC18.34■□□□□ 0.53
HTRA3P83110 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.34■□□□□ 0.53
HTRA3P83110 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 DNM1P30-201ENST00000563586 452 ntBASIC18.34■□□□□ 0.53
HTRA3P83110 AC027139.1-201ENST00000565286 951 ntBASIC18.34■□□□□ 0.53
HTRA3P83110 SAMD11P1-201ENST00000571429 661 ntBASIC18.34■□□□□ 0.53
HTRA3P83110 AC015910.1-201ENST00000579400 975 ntBASIC18.34■□□□□ 0.53
HTRA3P83110 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.34■□□□□ 0.53
HTRA3P83110 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.34■□□□□ 0.53
HTRA3P83110 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.34■□□□□ 0.53
HTRA3P83110 AP001002.3-201ENST00000623482 206 ntBASIC18.34■□□□□ 0.53
HTRA3P83110 MME-218ENST00000625667 363 ntTSL 5 BASIC18.34■□□□□ 0.53
HTRA3P83110 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HTRA3P83110 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.34■□□□□ 0.53
HTRA3P83110 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HTRA3P83110 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HTRA3P83110 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.33■□□□□ 0.53
HTRA3P83110 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HTRA3P83110 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTRA3P83110 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTRA3P83110 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HTRA3P83110 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTRA3P83110 TBC1D3J-201ENST00000620719 1426 ntBASIC18.33■□□□□ 0.53
HTRA3P83110 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HTRA3P83110 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HTRA3P83110 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
HTRA3P83110 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTRA3P83110 GPAA1P2-202ENST00000606848 1787 ntBASIC18.33■□□□□ 0.53
HTRA3P83110 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HTRA3P83110 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.33■□□□□ 0.53
HTRA3P83110 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTRA3P83110 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTRA3P83110 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTRA3P83110 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTRA3P83110 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HTRA3P83110 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
HTRA3P83110 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.33■□□□□ 0.52
HTRA3P83110 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.33■□□□□ 0.52
HTRA3P83110 ISCA2P1-201ENST00000425548 448 ntBASIC18.33■□□□□ 0.52
HTRA3P83110 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC18.33■□□□□ 0.52
HTRA3P83110 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.33■□□□□ 0.52
HTRA3P83110 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.33■□□□□ 0.52
HTRA3P83110 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC18.33■□□□□ 0.52
HTRA3P83110 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.33■□□□□ 0.52
HTRA3P83110 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.33■□□□□ 0.52
HTRA3P83110 AC000095.1-201ENST00000603208 874 ntBASIC18.33■□□□□ 0.52
HTRA3P83110 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms