Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.06□□□□□ -0.16
UBA52P62987 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
UBA52P62987 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBA52P62987 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
UBA52P62987 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBA52P62987 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 ELK2BP-201ENST00000415014 1224 ntBASIC14.06□□□□□ -0.16
UBA52P62987 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.06□□□□□ -0.16
UBA52P62987 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.06□□□□□ -0.16
UBA52P62987 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.06□□□□□ -0.16
UBA52P62987 YBX1P5-201ENST00000509441 847 ntBASIC14.06□□□□□ -0.16
UBA52P62987 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.06□□□□□ -0.16
UBA52P62987 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.06□□□□□ -0.16
UBA52P62987 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.06□□□□□ -0.16
UBA52P62987 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
UBA52P62987 MIR4469-201ENST00000583919 79 ntBASIC14.06□□□□□ -0.16
UBA52P62987 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.06□□□□□ -0.16
UBA52P62987 AC007326.2-201ENST00000624224 7579 ntBASIC14.06□□□□□ -0.16
UBA52P62987 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UBA52P62987 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.06□□□□□ -0.16
UBA52P62987 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.06□□□□□ -0.16
UBA52P62987 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.06□□□□□ -0.16
UBA52P62987 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.06□□□□□ -0.16
UBA52P62987 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.06□□□□□ -0.16
UBA52P62987 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UBA52P62987 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.06□□□□□ -0.16
UBA52P62987 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
UBA52P62987 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.05□□□□□ -0.16
UBA52P62987 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.05□□□□□ -0.16
UBA52P62987 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.05□□□□□ -0.16
UBA52P62987 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.05□□□□□ -0.16
UBA52P62987 AL603832.2-201ENST00000566195 2125 ntBASIC14.05□□□□□ -0.16
UBA52P62987 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
UBA52P62987 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.05□□□□□ -0.16
UBA52P62987 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.05□□□□□ -0.16
UBA52P62987 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 ALG1L5P-201ENST00000482043 771 ntBASIC14.05□□□□□ -0.16
UBA52P62987 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.05□□□□□ -0.16
UBA52P62987 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.05□□□□□ -0.16
UBA52P62987 AP002490.2-201ENST00000524791 560 ntBASIC14.05□□□□□ -0.16
UBA52P62987 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.05□□□□□ -0.16
UBA52P62987 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.05□□□□□ -0.16
UBA52P62987 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UBA52P62987 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
UBA52P62987 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UBA52P62987 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBA52P62987 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms