Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
WNT3AP56704 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
WNT3AP56704 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
WNT3AP56704 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.35■□□□□ 0.21
WNT3AP56704 PAUPAR-201ENST00000630360 2965 ntBASIC16.35■□□□□ 0.21
WNT3AP56704 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
WNT3AP56704 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.34■□□□□ 0.21
WNT3AP56704 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.34■□□□□ 0.21
WNT3AP56704 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
WNT3AP56704 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
WNT3AP56704 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.34■□□□□ 0.21
WNT3AP56704 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.34■□□□□ 0.21
WNT3AP56704 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
WNT3AP56704 RARRES2P9-201ENST00000565168 469 ntBASIC16.34■□□□□ 0.21
WNT3AP56704 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.34■□□□□ 0.21
WNT3AP56704 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 AC134684.3-201ENST00000641758 218 ntBASIC16.34■□□□□ 0.21
WNT3AP56704 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.34■□□□□ 0.21
WNT3AP56704 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.34■□□□□ 0.21
WNT3AP56704 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.34■□□□□ 0.21
WNT3AP56704 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.34■□□□□ 0.21
WNT3AP56704 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 AP001282.1-201ENST00000531301 1499 ntBASIC16.34■□□□□ 0.21
WNT3AP56704 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
WNT3AP56704 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.34■□□□□ 0.21
WNT3AP56704 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
WNT3AP56704 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
WNT3AP56704 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
WNT3AP56704 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
WNT3AP56704 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.33■□□□□ 0.21
WNT3AP56704 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
WNT3AP56704 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
WNT3AP56704 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
WNT3AP56704 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.33■□□□□ 0.2
WNT3AP56704 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.33■□□□□ 0.2
WNT3AP56704 ALG1L8P-201ENST00000533887 760 ntBASIC16.33■□□□□ 0.2
WNT3AP56704 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.33■□□□□ 0.2
WNT3AP56704 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
WNT3AP56704 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.33■□□□□ 0.2
WNT3AP56704 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.33■□□□□ 0.2
WNT3AP56704 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.33■□□□□ 0.2
WNT3AP56704 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
WNT3AP56704 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
WNT3AP56704 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
WNT3AP56704 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.33■□□□□ 0.2
WNT3AP56704 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.33■□□□□ 0.2
WNT3AP56704 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
WNT3AP56704 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
WNT3AP56704 AC134407.2-201ENST00000625089 1978 ntBASIC16.33■□□□□ 0.2
WNT3AP56704 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
WNT3AP56704 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
WNT3AP56704 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
WNT3AP56704 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
WNT3AP56704 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms