Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.93■□□□□ 0.14
PKNOX1P55347 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
PKNOX1P55347 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
PKNOX1P55347 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.93■□□□□ 0.14
PKNOX1P55347 AC092910.1-201ENST00000482027 1129 ntBASIC15.93■□□□□ 0.14
PKNOX1P55347 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.93■□□□□ 0.14
PKNOX1P55347 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.93■□□□□ 0.14
PKNOX1P55347 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PKNOX1P55347 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.93■□□□□ 0.14
PKNOX1P55347 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PKNOX1P55347 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 FLJ16779-201ENST00000612722 7638 ntBASIC15.93■□□□□ 0.14
PKNOX1P55347 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PKNOX1P55347 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
PKNOX1P55347 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PKNOX1P55347 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PKNOX1P55347 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.92■□□□□ 0.14
PKNOX1P55347 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PKNOX1P55347 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.92■□□□□ 0.14
PKNOX1P55347 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 VN2R19P-201ENST00000442399 1052 ntBASIC15.92■□□□□ 0.14
PKNOX1P55347 FAAHP1-202ENST00000446499 1238 ntBASIC15.92■□□□□ 0.14
PKNOX1P55347 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.92■□□□□ 0.14
PKNOX1P55347 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.92■□□□□ 0.14
PKNOX1P55347 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.92■□□□□ 0.14
PKNOX1P55347 AL773604.1-201ENST00000617417 272 ntBASIC15.92■□□□□ 0.14
PKNOX1P55347 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.92■□□□□ 0.14
PKNOX1P55347 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PKNOX1P55347 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PKNOX1P55347 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PKNOX1P55347 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PKNOX1P55347 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PKNOX1P55347 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
PKNOX1P55347 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PKNOX1P55347 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PKNOX1P55347 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PKNOX1P55347 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
PKNOX1P55347 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.91■□□□□ 0.14
PKNOX1P55347 AC004870.1-201ENST00000315132 882 ntBASIC15.91■□□□□ 0.14
PKNOX1P55347 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PKNOX1P55347 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.91■□□□□ 0.14
PKNOX1P55347 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.91■□□□□ 0.14
PKNOX1P55347 AC079781.3-201ENST00000449110 356 ntBASIC15.91■□□□□ 0.14
PKNOX1P55347 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.91■□□□□ 0.14
PKNOX1P55347 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.91■□□□□ 0.14
PKNOX1P55347 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PKNOX1P55347 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.91■□□□□ 0.14
PKNOX1P55347 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.91■□□□□ 0.14
PKNOX1P55347 AL691432.3-201ENST00000621860 400 ntBASIC15.91■□□□□ 0.14
PKNOX1P55347 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PKNOX1P55347 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PKNOX1P55347 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms