Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.93■□□□□ 0.14
GTF2A1P52655 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
GTF2A1P52655 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.93■□□□□ 0.14
GTF2A1P52655 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.93■□□□□ 0.14
GTF2A1P52655 RPPH1-201ENST00000516869 333 ntBASIC15.93■□□□□ 0.14
GTF2A1P52655 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.93■□□□□ 0.14
GTF2A1P52655 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 AC019294.4-201ENST00000561777 2905 ntBASIC15.93■□□□□ 0.14
GTF2A1P52655 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
GTF2A1P52655 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
GTF2A1P52655 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
GTF2A1P52655 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GTF2A1P52655 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC15.93■□□□□ 0.14
GTF2A1P52655 AC132938.6-201ENST00000623828 1655 ntBASIC15.92■□□□□ 0.14
GTF2A1P52655 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 DNM1P41-201ENST00000623634 3350 ntBASIC15.92■□□□□ 0.14
GTF2A1P52655 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.92■□□□□ 0.14
GTF2A1P52655 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
GTF2A1P52655 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.92■□□□□ 0.14
GTF2A1P52655 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
GTF2A1P52655 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.92■□□□□ 0.14
GTF2A1P52655 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.92■□□□□ 0.14
GTF2A1P52655 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.92■□□□□ 0.14
GTF2A1P52655 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.92■□□□□ 0.14
GTF2A1P52655 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 AC097488.1-201ENST00000507834 756 ntBASIC15.92■□□□□ 0.14
GTF2A1P52655 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.92■□□□□ 0.14
GTF2A1P52655 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.92■□□□□ 0.14
GTF2A1P52655 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.92■□□□□ 0.14
GTF2A1P52655 AC092666.2-201ENST00000613287 246 ntBASIC15.92■□□□□ 0.14
GTF2A1P52655 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.92■□□□□ 0.14
GTF2A1P52655 AC140479.7-201ENST00000636301 2332 ntBASIC15.92■□□□□ 0.14
GTF2A1P52655 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
GTF2A1P52655 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.92■□□□□ 0.14
GTF2A1P52655 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.92■□□□□ 0.14
GTF2A1P52655 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.92■□□□□ 0.14
GTF2A1P52655 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GTF2A1P52655 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.92■□□□□ 0.14
GTF2A1P52655 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
GTF2A1P52655 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.91■□□□□ 0.14
GTF2A1P52655 FGD5P1-202ENST00000614866 2498 ntBASIC15.91■□□□□ 0.14
GTF2A1P52655 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
GTF2A1P52655 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
GTF2A1P52655 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
GTF2A1P52655 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
GTF2A1P52655 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
GTF2A1P52655 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
GTF2A1P52655 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.91■□□□□ 0.14
GTF2A1P52655 CA15P1-201ENST00000481698 905 ntBASIC15.91■□□□□ 0.14
GTF2A1P52655 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.91■□□□□ 0.14
GTF2A1P52655 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.91■□□□□ 0.14
GTF2A1P52655 CD177P1-201ENST00000606252 935 ntBASIC15.91■□□□□ 0.14
GTF2A1P52655 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.91■□□□□ 0.14
GTF2A1P52655 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.91■□□□□ 0.14
GTF2A1P52655 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms