Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.25□□□□□ -0.29
CEACAM3P40198 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.25□□□□□ -0.29
CEACAM3P40198 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
CEACAM3P40198 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.25□□□□□ -0.29
CEACAM3P40198 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.25□□□□□ -0.29
CEACAM3P40198 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CEACAM3P40198 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.25□□□□□ -0.29
CEACAM3P40198 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.25□□□□□ -0.29
CEACAM3P40198 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 AC006449.6-201ENST00000612330 2296 ntBASIC13.25□□□□□ -0.29
CEACAM3P40198 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CEACAM3P40198 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CEACAM3P40198 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.25□□□□□ -0.29
CEACAM3P40198 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CEACAM3P40198 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.25□□□□□ -0.29
CEACAM3P40198 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CEACAM3P40198 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.24□□□□□ -0.29
CEACAM3P40198 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.24□□□□□ -0.29
CEACAM3P40198 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CEACAM3P40198 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.24□□□□□ -0.29
CEACAM3P40198 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AL627223.1-201ENST00000416693 442 ntBASIC13.24□□□□□ -0.29
CEACAM3P40198 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AC245100.5-201ENST00000452108 331 ntBASIC13.24□□□□□ -0.29
CEACAM3P40198 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AC069335.1-201ENST00000489972 472 ntBASIC13.24□□□□□ -0.29
CEACAM3P40198 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.24□□□□□ -0.29
CEACAM3P40198 RNA5SP410-201ENST00000516285 106 ntBASIC13.24□□□□□ -0.29
CEACAM3P40198 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AL138918.1-201ENST00000568306 659 ntBASIC13.24□□□□□ -0.29
CEACAM3P40198 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.24□□□□□ -0.29
CEACAM3P40198 AC084121.4-201ENST00000641598 221 ntBASIC13.24□□□□□ -0.29
CEACAM3P40198 AF228730.8-201ENST00000642140 221 ntBASIC13.24□□□□□ -0.29
CEACAM3P40198 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 REXO1L8P-201ENST00000604378 1897 ntBASIC13.24□□□□□ -0.29
CEACAM3P40198 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CEACAM3P40198 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.24□□□□□ -0.29
CEACAM3P40198 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CEACAM3P40198 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 MTHFR-217ENST00000641820 1569 ntBASIC13.24□□□□□ -0.29
CEACAM3P40198 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CEACAM3P40198 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.24□□□□□ -0.29
CEACAM3P40198 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.24□□□□□ -0.29
CEACAM3P40198 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.23□□□□□ -0.29
CEACAM3P40198 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.23□□□□□ -0.29
CEACAM3P40198 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms