Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HOXC12P31275 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HOXC12P31275 RNF216P1-203ENST00000404404 2427 ntBASIC14.4□□□□□ -0.1
HOXC12P31275 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 OR8S1-201ENST00000310194 1080 ntBASIC14.4□□□□□ -0.1
HOXC12P31275 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.4□□□□□ -0.1
HOXC12P31275 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXC12P31275 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.4□□□□□ -0.1
HOXC12P31275 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXC12P31275 AC027307.3-201ENST00000594262 1100 ntBASIC14.4□□□□□ -0.1
HOXC12P31275 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.4□□□□□ -0.1
HOXC12P31275 AL359881.2-201ENST00000602973 570 ntBASIC14.4□□□□□ -0.1
HOXC12P31275 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HOXC12P31275 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 GGT4P-201ENST00000623672 1708 ntBASIC14.4□□□□□ -0.1
HOXC12P31275 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXC12P31275 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXC12P31275 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXC12P31275 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HOXC12P31275 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXC12P31275 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXC12P31275 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 HLA-H-201ENST00000383620 1096 ntBASIC14.39□□□□□ -0.11
HOXC12P31275 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.39□□□□□ -0.11
HOXC12P31275 TREML5P-201ENST00000421694 576 ntBASIC14.39□□□□□ -0.11
HOXC12P31275 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.39□□□□□ -0.11
HOXC12P31275 CRB3P1-201ENST00000449338 276 ntBASIC14.39□□□□□ -0.11
HOXC12P31275 AL512638.1-201ENST00000457493 794 ntBASIC14.39□□□□□ -0.11
HOXC12P31275 MEIS3P1-201ENST00000495167 958 ntBASIC14.39□□□□□ -0.11
HOXC12P31275 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.39□□□□□ -0.11
HOXC12P31275 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.39□□□□□ -0.11
HOXC12P31275 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.39□□□□□ -0.11
HOXC12P31275 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 AL158211.3-201ENST00000607385 239 ntBASIC14.39□□□□□ -0.11
HOXC12P31275 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.39□□□□□ -0.11
HOXC12P31275 AL390754.1-201ENST00000619088 582 ntBASIC14.39□□□□□ -0.11
HOXC12P31275 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HOXC12P31275 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 GGT3P-204ENST00000453783 1664 ntBASIC14.39□□□□□ -0.11
HOXC12P31275 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HOXC12P31275 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HOXC12P31275 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.38□□□□□ -0.11
HOXC12P31275 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
HOXC12P31275 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HOXC12P31275 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms