Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA10P31260 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXA10P31260 FAM86HP-204ENST00000513466 959 ntBASIC19.46■□□□□ 0.71
HOXA10P31260 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA10P31260 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA10P31260 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.46■□□□□ 0.71
HOXA10P31260 AC015910.1-201ENST00000579400 975 ntBASIC19.46■□□□□ 0.71
HOXA10P31260 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HOXA10P31260 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.46■□□□□ 0.71
HOXA10P31260 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXA10P31260 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
HOXA10P31260 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA10P31260 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HOXA10P31260 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA10P31260 ME2P1-201ENST00000426028 1970 ntBASIC19.46■□□□□ 0.71
HOXA10P31260 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA10P31260 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HOXA10P31260 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA10P31260 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXA10P31260 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXA10P31260 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA10P31260 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA10P31260 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.45■□□□□ 0.7
HOXA10P31260 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA10P31260 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.45■□□□□ 0.7
HOXA10P31260 GAPDHP40-201ENST00000505218 1006 ntBASIC19.45■□□□□ 0.7
HOXA10P31260 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA10P31260 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA10P31260 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.45■□□□□ 0.7
HOXA10P31260 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA10P31260 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.45■□□□□ 0.7
HOXA10P31260 AC068587.10-201ENST00000641210 219 ntBASIC19.45■□□□□ 0.7
HOXA10P31260 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
HOXA10P31260 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA10P31260 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA10P31260 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.45■□□□□ 0.7
HOXA10P31260 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXA10P31260 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXA10P31260 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXA10P31260 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA10P31260 C2orf27AP3-201ENST00000434123 579 ntBASIC19.44■□□□□ 0.7
HOXA10P31260 GOLGA2P4-201ENST00000441462 777 ntBASIC19.44■□□□□ 0.7
HOXA10P31260 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA10P31260 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA10P31260 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXA10P31260 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 AL354718.3-201ENST00000616414 581 ntBASIC19.44■□□□□ 0.7
HOXA10P31260 CR382287.1-201ENST00000623954 586 ntBASIC19.44■□□□□ 0.7
HOXA10P31260 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HOXA10P31260 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA10P31260 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HOXA10P31260 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA10P31260 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA10P31260 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA10P31260 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA10P31260 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA10P31260 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA10P31260 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA10P31260 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HOXA10P31260 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA10P31260 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA10P31260 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA10P31260 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA10P31260 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA10P31260 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms