Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC011676.5-201ENST00000624864 2660 ntBASIC18.37■□□□□ 0.53
CNGA1P29973 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.37■□□□□ 0.53
CNGA1P29973 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.37■□□□□ 0.53
CNGA1P29973 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 AL589702.1-201ENST00000641229 1509 ntBASIC18.37■□□□□ 0.53
CNGA1P29973 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CNGA1P29973 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CNGA1P29973 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.37■□□□□ 0.53
CNGA1P29973 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CNGA1P29973 FLJ38576-201ENST00000623820 2459 ntBASIC18.37■□□□□ 0.53
CNGA1P29973 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNGA1P29973 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 AC084018.2-201ENST00000613093 2607 ntBASIC18.36■□□□□ 0.53
CNGA1P29973 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.36■□□□□ 0.53
CNGA1P29973 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.36■□□□□ 0.53
CNGA1P29973 AC093724.1-201ENST00000448659 1027 ntBASIC18.36■□□□□ 0.53
CNGA1P29973 KRT223P-202ENST00000449164 1292 ntBASIC18.36■□□□□ 0.53
CNGA1P29973 AC007389.4-201ENST00000454674 793 ntBASIC18.36■□□□□ 0.53
CNGA1P29973 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CNGA1P29973 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 AP005482.1-201ENST00000563722 1273 ntBASIC18.36■□□□□ 0.53
CNGA1P29973 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.36■□□□□ 0.53
CNGA1P29973 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNGA1P29973 REXO1L6P-201ENST00000603433 1515 ntBASIC18.36■□□□□ 0.53
CNGA1P29973 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 COX11-210ENST00000639671 696 ntBASIC18.36■□□□□ 0.53
CNGA1P29973 AL033527.4-201ENST00000641026 673 ntBASIC18.36■□□□□ 0.53
CNGA1P29973 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CNGA1P29973 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNGA1P29973 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CNGA1P29973 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.35■□□□□ 0.53
CNGA1P29973 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.35■□□□□ 0.53
CNGA1P29973 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CNGA1P29973 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.35■□□□□ 0.53
CNGA1P29973 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.35■□□□□ 0.53
CNGA1P29973 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.35■□□□□ 0.53
CNGA1P29973 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CNGA1P29973 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNGA1P29973 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.35■□□□□ 0.53
CNGA1P29973 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.35■□□□□ 0.53
CNGA1P29973 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CNGA1P29973 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.35■□□□□ 0.53
CNGA1P29973 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.35■□□□□ 0.53
CNGA1P29973 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.35■□□□□ 0.53
CNGA1P29973 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.35■□□□□ 0.53
CNGA1P29973 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.35■□□□□ 0.53
CNGA1P29973 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CNGA1P29973 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.35■□□□□ 0.53
CNGA1P29973 AC061975.2-201ENST00000581722 295 ntBASIC18.35■□□□□ 0.53
CNGA1P29973 AC099568.2-201ENST00000609194 695 ntBASIC18.35■□□□□ 0.53
CNGA1P29973 WFDC1-204ENST00000613603 549 ntBASIC18.35■□□□□ 0.53
CNGA1P29973 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CNGA1P29973 MIR6775-201ENST00000617557 69 ntBASIC18.35■□□□□ 0.53
CNGA1P29973 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNGA1P29973 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms