Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 FAM220BP-201ENST00000377689 816 ntBASIC13.89□□□□□ -0.19
TNFSF4P23510 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.89□□□□□ -0.19
TNFSF4P23510 AC142381.1-201ENST00000426099 345 ntBASIC13.89□□□□□ -0.19
TNFSF4P23510 METTL21AP1-201ENST00000438852 635 ntBASIC13.89□□□□□ -0.19
TNFSF4P23510 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.89□□□□□ -0.19
TNFSF4P23510 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.89□□□□□ -0.19
TNFSF4P23510 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.89□□□□□ -0.19
TNFSF4P23510 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.89□□□□□ -0.19
TNFSF4P23510 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.89□□□□□ -0.19
TNFSF4P23510 AC027612.4-201ENST00000605371 583 ntBASIC13.89□□□□□ -0.19
TNFSF4P23510 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
TNFSF4P23510 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 AL589702.1-201ENST00000641229 1509 ntBASIC13.89□□□□□ -0.19
TNFSF4P23510 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.89□□□□□ -0.19
TNFSF4P23510 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.89□□□□□ -0.19
TNFSF4P23510 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TNFSF4P23510 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TNFSF4P23510 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.88□□□□□ -0.19
TNFSF4P23510 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TNFSF4P23510 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.88□□□□□ -0.19
TNFSF4P23510 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
TNFSF4P23510 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.88□□□□□ -0.19
TNFSF4P23510 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.88□□□□□ -0.19
TNFSF4P23510 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TNFSF4P23510 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.88□□□□□ -0.19
TNFSF4P23510 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.88□□□□□ -0.19
TNFSF4P23510 AL353705.2-201ENST00000428243 662 ntBASIC13.88□□□□□ -0.19
TNFSF4P23510 CNN2P2-201ENST00000443536 909 ntBASIC13.88□□□□□ -0.19
TNFSF4P23510 CNN2P3-201ENST00000450201 906 ntBASIC13.88□□□□□ -0.19
TNFSF4P23510 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.88□□□□□ -0.19
TNFSF4P23510 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.88□□□□□ -0.19
TNFSF4P23510 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TNFSF4P23510 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.88□□□□□ -0.19
TNFSF4P23510 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.88□□□□□ -0.19
TNFSF4P23510 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.88□□□□□ -0.19
TNFSF4P23510 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.88□□□□□ -0.19
TNFSF4P23510 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.88□□□□□ -0.19
TNFSF4P23510 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.88□□□□□ -0.19
TNFSF4P23510 AL136317.3-201ENST00000618497 906 ntBASIC13.88□□□□□ -0.19
TNFSF4P23510 AP001059.3-201ENST00000619053 235 ntBASIC13.88□□□□□ -0.19
TNFSF4P23510 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.88□□□□□ -0.19
TNFSF4P23510 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.88□□□□□ -0.19
TNFSF4P23510 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.88□□□□□ -0.19
TNFSF4P23510 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TNFSF4P23510 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFSF4P23510 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFSF4P23510 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
TNFSF4P23510 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TNFSF4P23510 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TNFSF4P23510 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.87□□□□□ -0.19
TNFSF4P23510 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms