Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 RNPS1P1-201ENST00000507437 918 ntBASIC14.26□□□□□ -0.13
ATF1P18846 IGHV3-65-201ENST00000523210 341 ntBASIC14.26□□□□□ -0.13
ATF1P18846 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.26□□□□□ -0.13
ATF1P18846 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.26□□□□□ -0.13
ATF1P18846 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.26□□□□□ -0.13
ATF1P18846 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
ATF1P18846 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.26□□□□□ -0.13
ATF1P18846 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 AC012313.10-201ENST00000623509 926 ntBASIC14.26□□□□□ -0.13
ATF1P18846 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.25□□□□□ -0.13
ATF1P18846 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.25□□□□□ -0.13
ATF1P18846 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.25□□□□□ -0.13
ATF1P18846 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.25□□□□□ -0.13
ATF1P18846 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.25□□□□□ -0.13
ATF1P18846 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.25□□□□□ -0.13
ATF1P18846 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 AC008735.5-201ENST00000623544 497 ntBASIC14.25□□□□□ -0.13
ATF1P18846 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ATF1P18846 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
ATF1P18846 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATF1P18846 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATF1P18846 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ATF1P18846 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.24□□□□□ -0.13
ATF1P18846 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 PKD1P5-201ENST00000532415 10291 ntBASIC14.24□□□□□ -0.13
ATF1P18846 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
ATF1P18846 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.24□□□□□ -0.13
ATF1P18846 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.24□□□□□ -0.13
ATF1P18846 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATF1P18846 MRPL20P1-201ENST00000400819 433 ntBASIC14.24□□□□□ -0.13
ATF1P18846 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms