Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PPP3CBP16298 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP3CBP16298 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP3CBP16298 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PPP3CBP16298 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PPP3CBP16298 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP3CBP16298 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP3CBP16298 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PPP3CBP16298 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.6□□□□□ -0.07
PPP3CBP16298 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 AL365203.3-201ENST00000609742 2057 ntBASIC14.59□□□□□ -0.07
PPP3CBP16298 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP3CBP16298 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PPP3CBP16298 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PPP3CBP16298 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 SPDYE7P-202ENST00000420373 878 ntBASIC14.59□□□□□ -0.07
PPP3CBP16298 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 AC109322.1-201ENST00000524499 1264 ntBASIC14.59□□□□□ -0.07
PPP3CBP16298 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.59□□□□□ -0.07
PPP3CBP16298 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PPP3CBP16298 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP3CBP16298 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP3CBP16298 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP3CBP16298 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PPP3CBP16298 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.59□□□□□ -0.07
PPP3CBP16298 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PPP3CBP16298 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PPP3CBP16298 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PPP3CBP16298 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PPP3CBP16298 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PPP3CBP16298 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PPP3CBP16298 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
PPP3CBP16298 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.58□□□□□ -0.07
PPP3CBP16298 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PPP3CBP16298 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PPP3CBP16298 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.58□□□□□ -0.08
PPP3CBP16298 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.58□□□□□ -0.08
PPP3CBP16298 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 UXT-AS1-201ENST00000590504 1525 ntBASIC14.58□□□□□ -0.08
PPP3CBP16298 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PPP3CBP16298 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.58□□□□□ -0.08
PPP3CBP16298 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.58□□□□□ -0.08
PPP3CBP16298 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.58□□□□□ -0.08
PPP3CBP16298 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.58□□□□□ -0.08
PPP3CBP16298 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 MIR4492-201ENST00000581627 80 ntBASIC14.58□□□□□ -0.08
PPP3CBP16298 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.58□□□□□ -0.08
PPP3CBP16298 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.58□□□□□ -0.08
PPP3CBP16298 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms