Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 AL596087.1-201ENST00000400979 1969 ntBASIC15.04■□□□□ -0
UBL4AP11441 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 MCCD1P2-201ENST00000423228 335 ntBASIC15.04■□□□□ -0
UBL4AP11441 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 AC004832.2-201ENST00000426397 482 ntBASIC15.04■□□□□ -0
UBL4AP11441 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.04■□□□□ -0
UBL4AP11441 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 AC093724.1-201ENST00000448659 1027 ntBASIC15.04■□□□□ -0
UBL4AP11441 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.04■□□□□ -0
UBL4AP11441 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.04■□□□□ -0
UBL4AP11441 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 AL671883.3-201ENST00000603274 991 ntBASIC15.04■□□□□ -0
UBL4AP11441 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
UBL4AP11441 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 AC026691.1-201ENST00000602502 2017 ntBASIC15.04■□□□□ -0
UBL4AP11441 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.04■□□□□ -0
UBL4AP11441 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
UBL4AP11441 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
UBL4AP11441 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.03■□□□□ -0
UBL4AP11441 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 AL592424.1-201ENST00000563624 1536 ntBASIC15.03■□□□□ -0
UBL4AP11441 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.03■□□□□ -0
UBL4AP11441 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UBL4AP11441 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBL4AP11441 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.03■□□□□ -0
UBL4AP11441 YBX2P1-201ENST00000394192 760 ntBASIC15.03■□□□□ -0
UBL4AP11441 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.03■□□□□ -0
UBL4AP11441 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.03■□□□□ -0
UBL4AP11441 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.03■□□□□ -0
UBL4AP11441 AL355306.1-201ENST00000415580 579 ntBASIC15.03■□□□□ -0
UBL4AP11441 AP000347.1-202ENST00000435868 847 ntBASIC15.03■□□□□ -0
UBL4AP11441 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
UBL4AP11441 PRYP6-201ENST00000514804 343 ntBASIC15.03■□□□□ -0
UBL4AP11441 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.03■□□□□ -0
UBL4AP11441 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.03■□□□□ -0
UBL4AP11441 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
UBL4AP11441 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.03■□□□□ -0
UBL4AP11441 AC073439.1-201ENST00000624121 1774 ntBASIC15.03■□□□□ -0
UBL4AP11441 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBL4AP11441 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms